2. Fussball Bundesliga 1999/2000 Liga
| 1 | 13.08.1999 17:00 | FC St. Pauli | – | SpVgg Greuther Fürth | 0 : 0 | |
| 2 | 22.08.1999 13:00 | SV Stuttgarter Kickers | – | FC St. Pauli | 2 : 1 | |
| 3 | 29.08.1999 13:00 | FC St. Pauli | – | VfL Bochum 1848 | 0 : 0 | |
| 4 | 10.09.1999 17:00 | Tennis Borussia Berlin | – | FC St. Pauli | 2 : 0 | |
| 5 | 17.09.1999 17:00 | FC St. Pauli | – | Borussia Mönchengladbach | 0 : 2 | |
| 6 | 26.09.1999 13:00 | SV Waldhof Mannheim | – | FC St. Pauli | 1 : 3 | |
| 7 | 01.10.1999 17:00 | FC St. Pauli | – | Kickers Offenbach | 1 : 1 | |
| 8 | 15.10.1999 17:00 | SC Fortuna Köln | – | FC St. Pauli | 2 : 0 | |
| 9 | 24.10.1999 13:00 | FC St. Pauli | – | 1. FSV Mainz 05 | 2 : 2 | |
| 10 | 29.10.1999 17:00 | 1. FC Nürnberg | – | FC St. Pauli | 2 : 2 | |
| 11 | 05.11.1999 18:00 | FC St. Pauli | – | Chemnitzer FC | 0 : 0 | |
| 12 | 19.11.1999 18:00 | Hannover 96 | – | FC St. Pauli | 1 : 2 | |
| 13 | 28.11.1999 14:00 | FC St. Pauli | – | Karlsruher SC | 3 : 1 | |
| 14 | 05.12.1999 14:00 | Alemannia Aachen | – | FC St. Pauli | 3 : 1 | |
| 15 | 12.12.1999 14:00 | FC St. Pauli | – | FC Energie Cottbus | 1 : 0 | |
| 16 | 15.12.1999 18:00 | FC St. Pauli | – | 1. FC Köln | 1 : 2 | |
| 17 | 19.12.1999 14:00 | SC Rot-Weiß Oberhausen | – | FC St. Pauli | 2 : 2 | |
| 18 | 13.02.2000 14:00 | SpVgg Greuther Fürth | – | FC St. Pauli | 0 : 0 | |
| 19 | 20.02.2000 14:00 | FC St. Pauli | – | SV Stuttgarter Kickers | 2 : 1 | |
| 20 | 25.02.2000 18:00 | VfL Bochum 1848 | – | FC St. Pauli | 2 : 0 | |
| 21 | 05.03.2000 13:45 | FC St. Pauli | – | Tennis Borussia Berlin | 1 : 1 | |
| 22 | 10.03.2000 18:00 | Borussia Mönchengladbach | – | FC St. Pauli | 2 : 1 | |
| 23 | 17.03.2000 18:00 | FC St. Pauli | – | SV Waldhof Mannheim | 1 : 1 | |
| 24 | 24.03.2000 18:00 | Kickers Offenbach | – | FC St. Pauli | 0 : 1 | |
| 25 | 02.04.2000 13:00 | FC St. Pauli | – | SC Fortuna Köln | 0 : 0 | |
| 26 | 07.04.2000 17:00 | 1. FSV Mainz 05 | – | FC St. Pauli | 1 : 1 | |
| 27 | 14.04.2000 17:00 | FC St. Pauli | – | 1. FC Nürnberg | 0 : 0 | |
| 28 | 24.04.2000 18:15 | Chemnitzer FC | – | FC St. Pauli | 1 : 3 | |
| 29 | 28.04.2000 17:00 | FC St. Pauli | – | Hannover 96 | 0 : 2 | |
| 30 | 05.05.2000 17:00 | Karlsruher SC | – | FC St. Pauli | 0 : 0 | |
| 31 | 12.05.2000 17:00 | FC St. Pauli | – | Alemannia Aachen | 2 : 1 | |
| 32 | 18.05.2000 17:00 | FC Energie Cottbus | – | FC St. Pauli | 3 : 2 | |
| 33 | 21.05.2000 13:00 | 1. FC Köln | – | FC St. Pauli | 6 : 3 | |
| 34 | 26.05.2000 17:00 | FC St. Pauli | – | SC Rot-Weiß Oberhausen | 1 : 1 |